saferDev

Description

Set of functions for the development of R functions and pipelines, written according to the safer-R project specifications.

Content

Function	Description
all_args_here()	Verify that all the functions used inside a function are written with all their arguments. For instance: base::paste0(letters[1:2], collapse = NULL, recycle0 = FALSE) and not paste0(letters[1:2]).
arg_check()	Check expected values of arguments of functions: class, type, mode, length, restricted values panel, kind of numeric values in addition to the distinction between ‘integer’ and ‘double’ (proportion only? Inf values authorized? negative values authorized? Integers of type ‘double’?).
colons_check()	Verify that all the functions used inside a function are all referenced by their package attribution. For instance: base::mean() and not mean(), or saferDev:::.base_op_check() and not .base_op_check().
env_check()	Verify that object names in the environment defined by the pos argument are identical or not to object names in the above environments (following R Scope). This can be used to verify that names used for objects inside a function or in the working environment do not override names of objects already present in the above R environments, following the R scope.
get_message()	Return the error, warning or simple (non error non warning) message if ever exist of an instruction written between quotes.
is_function_here()	Check if required functions are present in installed packages. This controls for instance modifications of function names depending on package versions.
is_package_here()	Check if required packages are installed locally.
report()	Print a character string or a data object into a same log file.